| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 508 |
| Arabian Sea | Sea/Bay/Gulf | native | 5378 |
| Calamianes Islands | Sea/Bay/Gulf | native | 48613 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 2334 |
| Davao Gulf | Sea/Bay/Gulf | native | 45419 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 12419 |
| Gulf of Aden | Sea/Bay/Gulf | native | 5378 |
| Hsiao-liu-chiu | Sea/Bay/Gulf | native | 48445 |
| Indian Ocean | Sea/Bay/Gulf | native | 12419 |
| Indonesian Sea | Sea/Bay/Gulf | native | 5978 |
| Insular Pacific-Hawaiian | Sea/Bay/Gulf | native | 583 |
| Kimbe Bay | Sea/Bay/Gulf | native | 28888 |
| Kuroshio Current | Sea/Bay/Gulf | native | 12419 |
| Lanuza Bay | Sea/Bay/Gulf | native | 104756 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| New Zealand Shelf | Sea/Bay/Gulf | native | 8879 |
| North Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Northwest Australian Shelf | Sea/Bay/Gulf | native | 2334 |
| Pacific Central-American Coastal | Sea/Bay/Gulf | native | 9307 |
| Pacific Ocean | Sea/Bay/Gulf | native | 8879 |
| Persian Gulf | Sea/Bay/Gulf | native | 5378 |
| Peru-Galapagos Waters | Sea/Bay/Gulf | native | 5227 |
| Polynesian Waters | Sea/Bay/Gulf | native | 12419 |
| Red Sea | Sea/Bay/Gulf | native | 5378 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southern Palawan | Sea/Bay/Gulf | native | 114805 |
| Spratly Islands | Sea/Bay/Gulf | native | 48445 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 1602 |
| Tasman Sea | Sea/Bay/Gulf | native | 2334 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |
| Yellow Sea | Sea/Bay/Gulf | native | 4868 |