| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Andaman Sea | Sea/Bay/Gulf | native | 37773 |
| Chiku River | River (basin) | native | 36073 |
| East China Sea | Sea/Bay/Gulf | native | 11230 |
| Indian Ocean | Sea/Bay/Gulf | native | 4343 |
| Indonesian Sea | Sea/Bay/Gulf | native | 7050 |
| Pacific Ocean | Sea/Bay/Gulf | native | 5193 |
| Samar Sea | Sea/Bay/Gulf | native | 29039 |
| Shiliao River | River (basin) | native | 36073 |
| Somali Coastal Current | Sea/Bay/Gulf | native | 4343 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 2858 |
| Tsengwen River | River (basin) | native | 36073 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |