| Ecosystem | Type | Status | Ref. |
|---|---|---|---|
| Agulhas Current | Sea/Bay/Gulf | native | 53568 |
| Coral Sea and GBR | Sea/Bay/Gulf | native | 33390 |
| East Central Australian Shelf | Sea/Bay/Gulf | native | 27370 |
| Great Barrier Reef | Sea/Bay/Gulf | native | 33390 |
| Hsiao-liu-chiu | Sea/Bay/Gulf | native | 48451 |
| Indian Ocean | Sea/Bay/Gulf | native | 33390 |
| Kuroshio Current | Sea/Bay/Gulf | native | 27370 |
| Lingayen Gulf | Sea/Bay/Gulf | native | 5399 |
| Milne Bay | Sea/Bay/Gulf | native | 41464 |
| Northeast Australian Shelf | Sea/Bay/Gulf | native | 27370 |
| Pacific Ocean | Sea/Bay/Gulf | native | 27370 |
| Peng-hu Island | Sea/Bay/Gulf | native | 55073 |
| Red Sea | Sea/Bay/Gulf | native | 84159 |
| South China Sea | Sea/Bay/Gulf | native | 36648 |
| Southeast Australian Shelf | Sea/Bay/Gulf | native | 48497 |
| Sulu-Celebes Sea | Sea/Bay/Gulf | native | 45419 |
| Tubbataha Reefs | Sea/Bay/Gulf | native | 53416 |
| Yellow Sea | Sea/Bay/Gulf | native | 5193 |